BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015F12LP1|AL426891
(433 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 396 e-110
>3x_Contig1619
Length = 7770
Score = 396 bits (193), Expect = e-110
Identities = 207/211 (98%), Gaps = 1/211 (0%)
Strand = Plus / Plus
Query: 1 ataattaatatataccccgcggactacacctcccttcggggggggg-tatagtccgcggg 59
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3865 ataattaatatataccccgcggactacacctcccttcggggggggggtatagtccgcggg 3924
Query: 60 gattaataattctaataattataatttcttatacgatattttaagagataaaaactatat 119
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3925 gattaataattctaataattataatcgcttatacgatattttaagagataaaaactatat 3984
Query: 120 aattataatattccccgcggctcctcaccctacgaatgtagggtgagaaaccgcgggggg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3985 aattataatattccccgcggctcctcaccctacgaatgtagggtgagaaaccgcgggggg 4044
Query: 180 aaaaataaaaatataataatatattatwtat 210
||||||||||||||||||||||||||| |||
Sbjct: 4045 aaaaataaaaatataataatatattatatat 4075
Score = 146 bits (71), Expect = 5e-35
Identities = 76/79 (96%)
Strand = Plus / Plus
Query: 354 ggatttgaacctacgnagcytaaaagacttataatatctcaagtattacaccttaaacca 413
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 4218 ggatttgaacctacgaagcctaaaagacttataatatctcaagtattacaccttaaacca 4277
Query: 414 ctcagtcanccatccattt 432
|||||||| ||||||||||
Sbjct: 4278 ctcagtcaaccatccattt 4296
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.717 1.34
Gapped
Lambda K H
1.42 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2563
Number of Sequences: 1807
Number of extensions: 2563
Number of successful extensions: 127
Number of sequences better than 1.0e-20: 1
length of query: 433
length of database: 10,358,551
effective HSP length: 15
effective length of query: 418
effective length of database: 10,331,446
effective search space: 4318544428
effective search space used: 4318544428
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.7 bits)
S1: 11 (23.0 bits)
S2: 48 (98.9 bits)